STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_001720020Cystathionine beta-synthase (CBS) family protein. (234 aa)    
Predicted Functional Partners:
KFL_001250130
GMP synthase.
  
 0.781
KFL_003800100
Predicted glutamine synthetase.
  
 
 0.768
KFL_000570230
Dual specificity phosphatase.
   
 0.752
KFL_001610060
AB hydrolase-1 domain-containing protein.
    
  0.751
KFL_000050060
Protein tyrosine phosphate.
   
 0.714
KFL_000810020
Dual specificity protein phosphatase family protein.
   
 0.714
KFL_000090100
AMPK1_CBM domain-containing protein.
   
 0.706
KFL_001480050
Putative 5-AMP-activated protein kinase.
   
 0.706
KFL_005740020
5'-AMP-activated protein kinase beta subunit.
   
 0.706
KFL_000150050
Urease accessory protein D like.
  
 
 0.683
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.