STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_002880050Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (211 aa)    
Predicted Functional Partners:
KFL_000320080
EAP30/Vps36 family protein.
    
 0.989
KFL_000910270
VPS37 C-terminal domain-containing protein.
   
 0.989
KFL_000990220
Vacuolar sorting protein/ubiquitin receptor VPS23.
   
 0.977
KFL_003310130
Protein with Ubiquitin E2 variant domain.
   
 0.977
KFL_002030130
Uncharacterized protein.
   
 0.946
KFL_006560020
Uncharacterized protein.
   
 0.931
KFL_003350070
Uncharacterized protein.
    
   0.924
KFL_001150150
Vacuolar sorting protein.
   
 0.888
KFL_001930180
SNF7 family protein.
     
 0.858
KFL_002800110
Uncharacterized protein.
    
 0.833
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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