Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KFL_005730070Protein with EF-hand domain. (163 aa)    
Predicted Functional Partners:
KFL_001330050
AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein.
   
 0.750
KFL_000250505
Uncharacterized protein.
    
 
 0.651
KFL_004520080
Ras-related small GTPase.
    
 0.648
KFL_000670250
Serine/threonine-protein phosphatase.
    
 0.642
KFL_000080070
TONSOKU.
    
  0.623
KFL_010940020
Uncharacterized protein.
    
  0.620
KFL_003070150
Thioredoxin domain-containing protein.
    
 
 0.615
KFL_000680050
Calmodulin.
  
 
  0.610
KFL_001790310
Glutamine synthetase.
    
  0.575
KFL_000040270
Glutamine synthetase; Belongs to the glutamine synthetase family.
    
  0.573
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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