STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_000750270Membrane component of ER protein translocation complex. (364 aa)    
Predicted Functional Partners:
KFL_000280520
DnaJ / Sec63 Brl domains-containing protein.
   
 0.996
KFL_000620220
Uncharacterized protein.
    
 
 0.982
KFL_011730020
Serine Threonine protein kinase.
    
 
 0.982
KFL_006700020
Protein transport protein sec61 beta subunit.
    
 
 0.948
KFL_000450050
SecY protein transport family protein; Belongs to the SecY/SEC61-alpha family.
   
 
 0.944
KFL_001020100
U5 small nuclear ribonucleoprotein helicase.
     
 0.871
KFL_004170080
DEAD/DEAH box helicase domain containing protein.
     
 0.667
KFL_002990040
DNA/RNA helicase MER3/SLH1.
     
 0.667
CYN
Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
    
 
 0.666
KFL_004330090
Microsomal signal peptidase complex subunit.
    
 
 0.662
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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