STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_000010650Uncharacterized protein. (140 aa)    
Predicted Functional Partners:
KFL_004380030
Uncharacterized protein.
   
   0.672
KFL_004950030
Uncharacterized protein.
   
   0.662
KFL_003990080
Mitochondrial ribosomal protein L29.
   
   0.662
KFL_000650200
Mitochondrial ribosomal protein L13.
   
   0.658
KFL_008700060
Mitochondrial or chloroplast ribosomal protein S16.
   
   0.650
KFL_008520020
Mitochondrial ribosomal protein L4.
   
   0.650
KFL_000060820
Mitochondrial ribosomal protein L21.
   
   0.649
KFL_001360250
Pentatricopeptide repeat domain containing protein.
   
   0.641
KFL_000930030
Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
   
   0.639
KFL_000800240
Uncharacterized protein.
   
   0.638
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.