STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_000010360Uncharacterized protein. (576 aa)    
Predicted Functional Partners:
KFL_003600040
60S ribosomal protein L23A; Belongs to the universal ribosomal protein uL23 family.
    
   0.433
rpl36
50S ribosomal protein L36, chloroplastic.
    
 
 0.412
KFL_002540120
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
    
 
 0.412
rpl2
50S ribosomal protein L2, chloroplastic; Belongs to the universal ribosomal protein uL2 family.
   
   0.409
KFL_008730040
Mitochondrial ribosomal protein L2.
   
   0.409
KFL_000010620
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
   
   0.406
KFL_001600190
Chloroplast ribosomal protein L4.
    
   0.406
KFL_004610050
40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
    
   0.406
KFL_004560100
60S ribosomal protein L4.
    
   0.406
KFL_008520020
Mitochondrial ribosomal protein L4.
    
   0.406
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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