STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_000610210Tryptophan synthase. (491 aa)    
Predicted Functional Partners:
KFL_002660100
Phosphoribosylanthranilate isomerase.
 
 
 0.999
KFL_004020060
Indole-3-glycerol phosphate synthase.
 
 0.999
KFL_003390170
Anthranilate synthase beta subunit.
 
 
 0.999
KFL_007130040
Tryptophan synthase alpha chain; Belongs to the TrpA family.
 0.999
KFL_002130060
Phosphoribosylanthranilate transferase.
 
 0.996
KFL_000360090
Phosphoribosyltransferase family protein.
  
 
 0.989
KFL_000590140
Indole-3-glycerol phosphate synthase-like.
  
 
 0.989
KFL_000940270
Anthranilate synthase.
 
 
 0.970
KFL_001980190
Para-aminobenzoate (PABA) synthase family protein.
 
 
 0.955
KFL_007370030
Isochorismate synthase.
  
 
 0.955
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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