STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_000010440D-isomer-specific 2-hydroxy acid dehydrogenase superfamily; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (331 aa)    
Predicted Functional Partners:
KFL_001250270
Ketose-bisphosphate aldolase class-II family protein.
  
 
 0.915
KFL_000430150
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
    
 0.836
KFL_000060040
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
 
      0.835
KFL_000090230
Malate synthase; Belongs to the malate synthase family.
  
 
 0.735
KFL_000340200
Aspartate aminotransferase.
  
 0.729
KFL_005400100
Glycolate oxidase.
  
 
 0.722
KFL_002440030
Alanine-glyoxylate transaminase.
  
 
 0.719
KFL_006400020
D-glycerate 3-kinase.
    
 0.718
KFL_000290110
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.709
KFL_000400090
Pyruvate kinase.
  
 0.709
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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