STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_000300070Putative PHD domain containing homeodomain protein. (1416 aa)    
Predicted Functional Partners:
KFL_002210090
MRG domain-containing protein.
    
 
 0.976
KFL_007120040
Hypothetical virus protein.
   
 
 0.933
KFL_003110140
Paired amphipathic helix protein.
   
 
 0.920
KFL_002120150
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 
 0.908
KFL_006380060
Histone deacetylase complex catalytic component RPD3.
   
 
 0.908
KFL_003550030
Chloroplast inner envelope translocon protein.
   
 
 0.748
KFL_006890040
ENT domain-containing protein.
   
 
 0.748
KFL_000370400
Nucleosome assembly factor.
    
 
 0.735
KFL_002090210
WD_REPEATS_REGION domain-containing protein.
    
 
 0.735
KFL_005230070
Nucleosome remodeling factor subunit CAF1/NURF55/MSI1.
    
 
 0.735
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.