STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_000020060Uncharacterized protein. (659 aa)    
Predicted Functional Partners:
KFL_000980290
Basic region leucin zipper containing protein.
    
 0.992
KFL_004340080
Photolyase/cryptochrome.
    
 0.967
KFL_005020040
WD_REPEATS_REGION domain-containing protein.
  
0.962
KFL_004190050
Uncharacterized protein.
    
 
 0.944
KFL_002220040
De-etiolated-1.
    
 0.942
KFL_002400090
Protein EARLY FLOWERING 3.
    
 0.935
KFL_006300080
Putative Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.864
KFL_000210330
Ubiquitin-conjugating enzyme family protein.
    
 0.852
KFL_001260140
Ubiquitin conjugating enzyme family protein.
    
 0.852
KFL_002090040
Ubiquitin-conjugating enzyme E2-like protein.
    
 0.852
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.