STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_000070440Leucine-rich repeat protein kinase family protein. (347 aa)    
Predicted Functional Partners:
KFL_000040310
PHF5-like protein.
    
  0.652
KFL_009770030
Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.
    
 0.643
KFL_003090130
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.640
KFL_000670020
Small nuclear ribonucleoprotein Sm D2.
    
 0.634
KFL_004680040
Small nuclear ribonucleoprotein-associated protein.
    
 0.634
KFL_005650010
Small nuclear ribonucleoprotein F.
    
  0.633
KFL_002280010
Small nuclear ribonucleoprotein G.
    
  0.627
KFL_000650090
Putative serine-threonine/tyrosine-protein kinase catalytic domain containing protein.
  
 
  0.623
KFL_001690110
Eukaryotic translation elongation factor 1 gamma.
    
  0.603
KFL_001280030
Serine/threonine-protein kinase.
  
 
   0.602
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.