STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_000090100AMPK1_CBM domain-containing protein. (594 aa)    
Predicted Functional Partners:
KFL_000290150
Uncharacterized protein.
   
 0.744
KFL_000070190
Cystathionine beta-synthase family protein.
   
 0.744
KFL_003590080
Cystathionine beta-synthase domain containing protein.
   
 0.744
KFL_005480070
Uncharacterized protein.
   
 0.744
KFL_005480110
Uncharacterized protein.
   
 0.744
KFL_016720010
Cystathionine beta-synthase (CBS) family protein.
   
 0.744
KFL_001720020
Cystathionine beta-synthase (CBS) family protein.
   
 0.706
KFL_000660110
Cystathionine beta-synthase family protein.
   
 0.706
KFL_003580060
CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein.
   
 0.706
KFL_008640020
Uncharacterized protein.
   
 0.706
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.