STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_000090590Zinc finger RING-CH-type domain containing protein. (437 aa)    
Predicted Functional Partners:
KFL_001240010
Transcription factor.
    
 
 0.597
KFL_001040360
UBX domain-containing protein.
    
 
 0.441
KFL_002330080
UBX domain-containing protein.
    
 
 0.441
KFL_006930020
Ubx domain-containing protein.
    
 
 0.441
KFL_005530060
Thioredoxin domain-containing protein.
    
 
 0.441
KFL_011640010
Thioredoxin domain-containing protein.
    
 
 0.441
KFL_004860070
Von Hippel-Lindau disease tumour suppressor beta/alpha domain.
   
 
  0.438
KFL_000020240
Ubiquitin-conjugating enzyme.
    
 
 0.415
KFL_000280460
Ubiquitin-conjugating enzyme.
    
 
 0.415
KFL_004060040
Uncharacterized protein.
    
 
 0.415
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.