STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_000200070Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (795 aa)    
Predicted Functional Partners:
KFL_001800030
Putative Endoribonuclease.
   
 0.988
KFL_007590040
Diphthami_syn_2 domain-containing protein.
   
 0.988
KFL_004650030
60S ribosomal protein L5.
  
 0.957
KFL_001600050
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.956
KFL_003600040
60S ribosomal protein L23A; Belongs to the universal ribosomal protein uL23 family.
  
 0.956
KFL_000080510
Ribosomal protein S6 family protein.
  
 
 0.952
KFL_001420100
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
 
 0.952
KFL_003800050
60S ribosomal protein L7 family protein.
  
 0.950
KFL_001430140
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
  0.933
KFL_002370050
40S ribosomal protein S28.
   
 0.932
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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