STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_000220210Cupin_2 domain-containing protein. (307 aa)    
Predicted Functional Partners:
KFL_001470220
Allantoate amidohydrolase.
  
  
 0.938
KFL_000220200
Ureidoglycolate amidohydrolase.
  
  
 0.898
KFL_000640140
Ureidoglycolate amidohydrolase.
  
  
 0.897
KFL_000200380
Peroxisomal adenine nucleotide carrier; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
  0.817
KFL_001870040
Peroxisomal membrane protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
  0.817
KFL_003430140
Peptidase m20-m25-m40 family protein.
  
 
 0.766
KFL_000390220
WD domain-containing protein.
  
 
 0.766
KFL_001060050
Uncharacterized protein.
  
 
 0.766
KFL_002890150
Acetylornithine deacetylase.
  
 
 0.766
KFL_000850080
Aminotransferase class V.
    
  0.669
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.