STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_000020200ADP-ribosylation factor. (349 aa)    
Predicted Functional Partners:
KFL_005540070
GTP-binding ADP-ribosylation factor-like protein ARL2.
  
0.863
KFL_010570020
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
   
  0.829
KFL_004170070
Rab family GTPase.
    
 0.818
KFL_001260080
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
  0.776
KFL_001250140
RIC1 domain-containing protein.
    
 0.766
KFL_000760230
Uncharacterized protein.
    
 0.756
KFL_000020010
Syntaxin of plants; Belongs to the syntaxin family.
    
  0.746
KFL_002320050
Rab family GTPase.
    
 0.709
KFL_004520080
Ras-related small GTPase.
    
 0.709
KFL_001390250
Vacuolar protein sorting-associated protein 53.
     
 0.705
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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