Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KFL_000140430Uncharacterized protein. (1651 aa)    
Predicted Functional Partners:
KFL_010940020
Uncharacterized protein.
   
  0.695
KFL_000860350
Uncharacterized protein.
    
 0.644
KFL_000250505
Uncharacterized protein.
   
 0.608
KFL_001250270
Ketose-bisphosphate aldolase class-II family protein.
    
  0.596
KFL_007120040
Hypothetical virus protein.
    
 0.591
KFL_001330050
AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein.
   
 0.581
KFL_008450030
Uncharacterized protein.
    
 0.547
KFL_000080070
TONSOKU.
    
  0.539
KFL_011820010
HMG (High mobility group) box protein.
    
 
 0.539
KFL_000880190
Putative traf-type zinc finger family protein.
    
 0.529
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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