STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_000270340Uncharacterized protein. (171 aa)    
Predicted Functional Partners:
KFL_000860190
Intraflagellar transport 81-like protein.
    
 0.994
KFL_000930050
Uncharacterized protein.
   
 0.979
KFL_000560350
Intraflagellar transport protein 57.
   
 0.978
KFL_000760230
Uncharacterized protein.
    
 0.974
KFL_000870060
TPR_REGION domain-containing protein.
   
 0.969
KFL_002860130
Uncharacterized protein.
    
 0.966
KFL_006890060
Intraflagellar transport protein 80 homolog.
   
 0.966
KFL_009780010
Uncharacterized protein.
    
 0.963
KFL_001020180
WD_REPEATS_REGION domain-containing protein.
    
 0.954
KFL_001060220
TPR Domain containing protein.
    
 0.941
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.