STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_000280350Palmitoyl protein thioesterase. (340 aa)    
Predicted Functional Partners:
KFL_000270510
Plastid long-Chain Acyl-CoA Synthetase.
     
 0.909
KFL_008740010
O-acyltransferase.
     
 0.902
KFL_007450040
Acyl-ACP Synthetase.
   
 
 0.875
PSD2
Phosphatidylserine decarboxylase 2 alpha chain; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type II sub-subfamily.
    
 0.845
KFL_001610060
AB hydrolase-1 domain-containing protein.
  
 
 0.835
KFL_001290040
Long-Chain Acyl-CoA Synthetase.
   
 
 0.821
KFL_002270090
Long-Chain Acyl-CoA Synthetase.
   
 
 0.821
KFL_002740140
Long-Chain Acyl-CoA Synthetase.
   
 
 0.821
KFL_006070030
Peroxisome Long-Chain Acyl-CoA Synthetase.
   
 
 0.821
KFL_007270040
Ketol-acid reductoisomerase; Belongs to the ketol-acid reductoisomerase family.
  
 
 0.821
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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