STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_000220220GDP-L-fucose synthase. (330 aa)    
Predicted Functional Partners:
KFL_004210060
GDP-mannose 4,6 dehydratase.
 0.994
KFL_001430140
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.819
KFL_001600050
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
  0.812
KFL_003470040
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
  0.794
KFL_000740150
UDP-glucose 6-dehydrogenase.
  
 0.788
KFL_006380040
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
  0.787
KFL_011590030
40S ribosomal protein S10.
   
  0.785
KFL_002370050
40S ribosomal protein S28.
   
  0.784
KFL_002980140
Beta-ketoacyl synthase.
  
 0.781
KFL_000430150
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
    
 0.778
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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