STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATBGlutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily. (521 aa)    
Predicted Functional Partners:
KFL_001210070
Aspartyl-tRNA synthetase.
 
 0.999
GATA
Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln).
 0.999
KFL_000320320
Aspartyl/Asparaginyl-tRNA synthetase class IIb.
 
 0.995
KFL_000290500
Amidase domain-containing protein.
 
 0.980
KFL_000040300
Aspartyl/Asparaginyl-tRNA synthetase class IIb.
  
 0.978
KFL_002150120
Aspartyl/Asparaginyl-tRNA synthetase class IIb.
 
 0.978
KFL_001690020
Putative glutaminyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 0.977
KFL_001300090
Glutamyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.958
KFL_001900140
Cytoplasmic glutamyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 0.958
KFL_000160190
Amidase family protein.
 0.949
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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