STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_000340120WD repeat-containing protein. (941 aa)    
Predicted Functional Partners:
KFL_000570170
WD40 repeat protein.
   
 0.999
KFL_005930050
Embryo sac development arrest 13.
  
0.999
KFL_000650230
WD domain containing protein.
  
0.999
KFL_002410110
U3 small nucleolar RNA-associated protein 22.
   
 0.999
KFL_001980200
WD40-repeat-containing subunit of the 18S rRNA processing complex.
   
0.999
KFL_002500190
U3 small nucleolar RNA-associated protein 6.
   
 0.999
KFL_006700030
WD40 repeat protein.
  
 0.999
KFL_005510060
WD-40 protein.
   
 0.999
KFL_007820050
U3 small nucleolar RNA-associated protein 5.
  
 0.999
KFL_008710040
WD40-repeat-containing subunit of the 18S rRNA processing complex.
  
0.999
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.