STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_000370150Mago nashi family protein. (147 aa)    
Predicted Functional Partners:
KFL_005840040
RNA-binding protein 8A.
  
 0.999
KFL_000240525
Smg4_UPF3 domain-containing protein.
    
 0.988
KFL_000140630
Pym super family protein.
    
 
 0.985
KFL_000140100
Eukaryotic translation initiation factor eIF-4A; Belongs to the DEAD box helicase family.
   
 0.985
KFL_004340070
THO complex subunit 4.
   
 0.978
KFL_001070250
EIF4A3, FAL1.
   
 0.976
KFL_006910070
RRM superfamily protein.
   
 0.950
KFL_008440040
Eukaryotic translation initiation factor eIF-4A; Belongs to the DEAD box helicase family.
   
 0.948
KFL_004160140
Btz domain-containing protein.
    
 0.942
KFL_003090130
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
   0.940
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.