STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_000830050Putative chloroplast ribosomal protein L35. (135 aa)    
Predicted Functional Partners:
KFL_001600190
Chloroplast ribosomal protein L4.
   
   0.866
KFL_003600040
60S ribosomal protein L23A; Belongs to the universal ribosomal protein uL23 family.
    
   0.857
KFL_008590050
Mitochondrial or chloroplast ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.
   
   0.743
KFL_008520020
Mitochondrial ribosomal protein L4.
   
   0.731
KFL_000010620
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
   
   0.665
KFL_000930180
Chloroplast ribosomal protein S20.
   
   0.662
KFL_002440120
Mitochondrial or chloroplast ribosomal protein S17.
   
   0.662
KFL_002550080
Chloroplast ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
   
   0.662
KFL_004040030
Mitochondrial or chloroplast ribosomal protein L18.
   
   0.662
KFL_005740060
50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.
   
   0.662
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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