STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_000990250Epimerase domain-containing protein. (282 aa)    
Predicted Functional Partners:
KFL_001600050
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.935
KFL_004350080
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
  0.921
KFL_011590030
40S ribosomal protein S10.
   
 0.921
KFL_004370020
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.915
KFL_001430140
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.913
KFL_003470040
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.912
KFL_000350260
40S ribosomal protein S19.
   
 0.909
KFL_004610050
40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
   
 0.906
KFL_001700060
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
  0.904
KFL_006380040
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.901
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
Server load: low (30%) [HD]