STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_001050140Uncharacterized protein. (378 aa)    
Predicted Functional Partners:
KFL_000490050
ATG13 domain-containing protein.
   
 0.788
KFL_002980140
Beta-ketoacyl synthase.
    
 0.785
KFL_000060600
Uncharacterized protein.
     
 0.604
KFL_001340150
Uncharacterized protein.
     
 0.595
KFL_004910020
Carrier domain-containing protein.
     
 0.595
KFL_006760020
Carrier domain-containing protein.
     
 0.595
KFL_006760045
Carrier domain-containing protein.
     
 0.595
KFL_003050130
Asparate aminotransferase.
 
   
  0.496
KFL_000330060
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
     
 0.494
KFL_004750040
Ras-related GTP-binding protein.
    
  0.491
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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