STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_001050080Chlorophyllase. (318 aa)    
Predicted Functional Partners:
KFL_006320030
Chlorophyll synthase.
     
 0.809
KFL_000030700
Chlorophyllide a oxygenase.
     
 0.806
KFL_001670070
NADPH-protochlorophyllide oxidoreductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide); Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily.
     
 0.805
KFL_003760070
Chlorophyll b reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.801
KFL_003200100
Metallopeptidase M24 family protein.
     
 0.563
KFL_005080010
Uncharacterized protein.
     
 0.548
KFL_000060380
Translocon at the inner envelope membrane of chloroplast TIC55.
     
 0.475
KFL_000010110
Rieske domain-containing protein.
     
 0.475
KFL_004900060
Rieske domain-containing protein.
     
 0.475
KFL_000380010
Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
     
 0.430
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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