STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_001060060Regulatory particle AAA-ATPase; Belongs to the AAA ATPase family. (443 aa)    
Predicted Functional Partners:
KFL_000900280
26S proteasome subunit RPN8.
   
 0.999
KFL_000020420
26S proteasome AAA-ATPase subunit; Belongs to the AAA ATPase family.
  
0.999
KFL_000500370
26S proteasome regulatory subunit.
   
 0.999
KFL_000580300
26S proteasome non-ATPase regulatory subunit.
   
 0.999
KFL_000200400
Proteasome regulatory complex ATPase; Belongs to the AAA ATPase family.
  
0.999
KFL_000430180
26S proteasome regulatory complex ATPase RPT1; Belongs to the AAA ATPase family.
  
0.999
KFL_000930190
26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.999
KFL_001250200
26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.999
KFL_001040200
Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.
   
 0.999
KFL_003560140
Regulatory particle triple-A ATPase; Belongs to the AAA ATPase family.
  
0.999
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.