STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_000910320Uncharacterized protein. (438 aa)    
Predicted Functional Partners:
KFL_001340110
Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.
    
  0.606
KFL_000290350
TPR_REGION domain-containing protein.
    
  0.585
KFL_000450070
Aspartyl/glutamyl-tRNA amidotransferase subunit A.
   
 
  0.585
KFL_001070180
Mitochondrial Rho GTPase.
    
  0.585
KFL_000920280
Voltage dependent anion channel.
   
 
  0.566
KFL_000180110
Nuclear pore complex Nup155 component.
    
  0.447
KFL_008910050
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
 
 0.442
KFL_000490210
Uncharacterized protein.
    
  0.441
KFL_000940300
Peptidylprolyl isomerase.
    
  0.441
KFL_001940080
Peptidylprolyl isomerase.
    
  0.441
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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