STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_000660240Uncharacterized protein. (407 aa)    
Predicted Functional Partners:
KFL_004900070
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.852
KFL_000230120
A20-type domain-containing protein.
   
 0.782
KFL_002450090
VPS45 vacuolar protein sorting 45; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.753
KFL_003790050
Phosphatidylinositol 3-kinase; Belongs to the PI3/PI4-kinase family.
    
 0.739
KFL_004120100
Rab GDP dissociation inhibito.
    
 0.738
KFL_004750040
Ras-related GTP-binding protein.
   
 0.722
KFL_001730230
RAB geranylgeranyl transferase alpha subunit.
    
 0.700
KFL_005790090
Protein prenylyltransferase superfamily protein.
    
 0.700
KFL_001600170
Rab family GTPase.
   
 0.678
KFL_004170070
Rab family GTPase.
   
 0.671
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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