STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_001200090PGA_cap domain-containing protein. (391 aa)    
Predicted Functional Partners:
KFL_002980140
Beta-ketoacyl synthase.
     
 0.681
KFL_000790240
Plastocyanin; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I. Belongs to the plastocyanin family.
   
 0.665
KFL_001360190
Plastocyanin; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I. Belongs to the plastocyanin family.
   
 0.665
KFL_008450030
Uncharacterized protein.
    
 0.649
KFL_000050290
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
    
 0.642
KFL_003980010
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
    
 0.642
KFL_000200260
Secretion-associated RAS super family; Belongs to the small GTPase superfamily. SAR1 family.
     
 0.600
KFL_000770070
SEC1 family transport protein SLY1; Belongs to the STXBP/unc-18/SEC1 family.
     
 0.576
KFL_002200130
Uncharacterized protein.
    
 0.570
KFL_005450050
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
 
 0.561
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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