STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_000710210Glycosylphosphatidylinositol transamidase. (930 aa)    
Predicted Functional Partners:
KFL_006260040
Phosphatidylinositol glycan class T.
  
 0.995
KFL_001860180
GPI-anchor transamidase.
    
 0.993
KFL_001540190
Phosphatidylinositol glycan class U.
   
 0.992
KFL_006560010
Phosphatidylinositol glycan class S.
   
 0.992
KFL_003230150
Uncharacterized protein.
   
 0.980
KFL_003470080
Uncharacterized protein.
    
 0.928
KFL_000450320
Phosphatidylinositol glycan class O.
   
 0.927
KFL_001860220
Phosphodiesterase/nucleotide pyrophosphatase.
   
 0.624
KFL_005080140
Uncharacterized protein.
   
 0.624
KFL_000800300
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.
   
 
 0.519
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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