KFL_000860330 protein (Klebsormidium nitens)

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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co-expression

protein homology

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Score

KFL_000860330

TPR_REGION domain-containing protein. (317 aa)

Predicted Functional Partners:

KFL_000500440

0.746

KFL_005900050

0.706

KFL_004940080

0.653

KFL_002030120

0.589

KFL_001840050

0.589

matKa

0.564

KFL_001030090

0.564

KFL_001680090

0.564

KFL_003600080

0.564

KFL_000200590

0.559

Your Current Organism:

Klebsormidium nitens

NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KFL_000200590	KFL_000860330	A0A1Y1HQP0	A0A1Y1HXH2	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.559
KFL_000200590	KFL_001030090	A0A1Y1HQP0	A0A1Y1HU89	Uncharacterized protein.	PHD Zn-finger proteins.	0.742
KFL_000200590	KFL_001680090	A0A1Y1HQP0	A0A1Y1HZ37	Uncharacterized protein.	ARID domain-containing protein.	0.742
KFL_000200590	KFL_001840050	A0A1Y1HQP0	A0A1Y1I6F6	Uncharacterized protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.777
KFL_000200590	KFL_002030120	A0A1Y1HQP0	A0A1Y1I1E7	Uncharacterized protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.777
KFL_000200590	KFL_003600080	A0A1Y1HQP0	A0A1Y1IDN7	Uncharacterized protein.	RING FYVE PHD zinc finger superfamily protein.	0.742
KFL_000200590	KFL_004940080	A0A1Y1HQP0	A0A1Y1IM34	Uncharacterized protein.	Forkhead-associated (FHA) domain-containing protein.	0.786
KFL_000200590	KFL_005900050	A0A1Y1HQP0	A0A1Y1IKS0	Uncharacterized protein.	Alpha/beta-Hydrolases superfamily protein.	0.858
KFL_000200590	matKa	A0A1Y1HQP0	A0A0U9HKU3	Uncharacterized protein.	MatKa.	0.742
KFL_000500440	KFL_000860330	A0A1Y1HNS5	A0A1Y1HXH2	Ubiquitin carboxyl-terminal hydrolase.	TPR_REGION domain-containing protein.	0.746
KFL_000500440	KFL_004940080	A0A1Y1HNS5	A0A1Y1IM34	Ubiquitin carboxyl-terminal hydrolase.	Forkhead-associated (FHA) domain-containing protein.	0.810
KFL_000860330	KFL_000200590	A0A1Y1HXH2	A0A1Y1HQP0	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.559
KFL_000860330	KFL_000500440	A0A1Y1HXH2	A0A1Y1HNS5	TPR_REGION domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.746
KFL_000860330	KFL_001030090	A0A1Y1HXH2	A0A1Y1HU89	TPR_REGION domain-containing protein.	PHD Zn-finger proteins.	0.564
KFL_000860330	KFL_001680090	A0A1Y1HXH2	A0A1Y1HZ37	TPR_REGION domain-containing protein.	ARID domain-containing protein.	0.564
KFL_000860330	KFL_001840050	A0A1Y1HXH2	A0A1Y1I6F6	TPR_REGION domain-containing protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.589
KFL_000860330	KFL_002030120	A0A1Y1HXH2	A0A1Y1I1E7	TPR_REGION domain-containing protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.589
KFL_000860330	KFL_003600080	A0A1Y1HXH2	A0A1Y1IDN7	TPR_REGION domain-containing protein.	RING FYVE PHD zinc finger superfamily protein.	0.564
KFL_000860330	KFL_004940080	A0A1Y1HXH2	A0A1Y1IM34	TPR_REGION domain-containing protein.	Forkhead-associated (FHA) domain-containing protein.	0.653
KFL_000860330	KFL_005900050	A0A1Y1HXH2	A0A1Y1IKS0	TPR_REGION domain-containing protein.	Alpha/beta-Hydrolases superfamily protein.	0.706

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Network Stats

number of nodes:

4

number of edges:

5

average node degree:

2.5

avg. local clustering coefficient:

0.833

expected number of edges:

3

PPI enrichment p-value:

0.157

your network does not have significantly more
interactions than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0045226

Extracellular polysaccharide biosynthetic process

3 of 8

1.95

1.04

0.0099

GO:0009225

Nucleotide-sugar metabolic process

3 of 13

1.74

0.98

0.0110

GO:0019305

dTDP-rhamnose biosynthetic process

2 of 2

2.37

0.97

0.0167

GO:1901137

Carbohydrate derivative biosynthetic process

5 of 133

0.95

0.6

0.0167

GO:1901135

Carbohydrate derivative metabolic process

6 of 196

0.86

0.55

0.0167

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:2951

Mixed, incl. Extracellular polysaccharide metabolic process, and Glycosyltransferase subfamily 4-like, N-terminal domain

10 of 16

2.17

6.92

8.23e-18

CL:2970

Mixed, incl. Glycosyl transferase, family 1, and Glycosyl transferase family group 2

6 of 6

2.37

5.01

5.49e-11

CL:2947

Mixed, incl. Polysaccharide biosynthetic process, and Glycosyl transferases group 1

11 of 62

1.62

3.85

1.06e-15

CL:2954

dTDP-rhamnose metabolic process, and Polyketide sugar unit biosynthesis

4 of 5

2.28

3.01

1.10e-06

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

ane00525

Acarbose and validamycin biosynthesis

2 of 2

2.37

1.18

0.0065

ane00523

Polyketide sugar unit biosynthesis

2 of 2

2.37

1.18

0.0065

ane00521

Streptomycin biosynthesis

2 of 3

2.2

1.17

0.0065

ane00541

O-Antigen nucleotide sugar biosynthesis

2 of 7

1.83

1.02

0.0097

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF13692

Glycosyl transferases group 1

3 of 20

1.55

0.71

0.0362

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR001296

Glycosyl transferase, family 1

3 of 10

1.85

0.99

0.0119

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