STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_001290240Lipase_3 domain-containing protein. (1296 aa)    
Predicted Functional Partners:
KFL_000100160
AIR9 protein.
  
     0.519
KFL_000770080
Splicing factor 3B subunit 3.
  
     0.518
KFL_004730010
SH3 domain-containing protein.
  
     0.512
KFL_000250170
DUF1995 domain-containing protein.
  
     0.497
KFL_002980150
AIR9 protein.
  
     0.495
KFL_004620110
Clathrin adaptor complexes medium subunit family protein.
  
     0.486
KFL_004510090
Vacuolar protein sorting-associated protein.
  
     0.485
KFL_000180580
Fmp27_GFWDK domain-containing protein.
  
     0.479
KFL_002970050
Vacuolar protein sorting-associated protein.
  
     0.475
KFL_002460090
No exine formation 1.
  
     0.450
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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