STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_000800340Uncharacterized protein. (899 aa)    
Predicted Functional Partners:
KFL_002590130
Uncharacterized protein.
  
 
 0.832
KFL_003050050
Uncharacterized protein.
  
   0.769
KFL_001160030
Uncharacterized protein.
  
 
   0.768
KFL_001760130
Karyopherin alpha.
  
 
 
 0.716
KFL_002300050
Uncharacterized protein.
  
 
   0.704
KFL_001430010
Uncharacterized protein.
    
 
 0.667
KFL_002360090
Uncharacterized protein.
    
   0.624
KFL_000130380
Uncharacterized protein.
    
   0.624
KFL_001170140
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.624
KFL_000930220
Uncharacterized protein.
    
   0.624
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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