STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_001590120Transcriptional regulators binding to the GC-rich sequences. (882 aa)    
Predicted Functional Partners:
KFL_001330140
RNA helicase family protein.
    
 0.846
KFL_000500110
G-patch domain-containing protein.
    
 0.784
KFL_000520390
Uncharacterized protein.
    
 0.784
KFL_005110010
G-patch domain-containing protein.
    
 0.784
KFL_004610140
Putaive Pre-mRNA-processing-splicing factor.
    
   0.781
KFL_000050190
Pre-mRNA-splicing factor SYF2.
    
  0.773
KFL_003750110
Pre-mRNA-processing factor 17.
     
 0.690
KFL_001040320
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.660
KFL_009580030
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.660
KFL_000610120
Pre-mRNA-splicing factor.
   
  0.634
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.