STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_001020020Uncharacterized protein. (431 aa)    
Predicted Functional Partners:
KFL_015910010
Uncharacterized protein.
    
   0.891
KFL_001340060
Uncharacterized protein; Belongs to the peptidase C1 family.
    
   0.860
KFL_004750040
Ras-related GTP-binding protein.
    
  0.546
KFL_002580080
Vesicle-fusing ATPase.
    
  0.543
KFL_004520080
Ras-related small GTPase.
   
 0.490
KFL_000690350
Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.
    
   0.434
KFL_005020030
GTP-binding protein (ODN superfamily).
    
   0.432
KFL_000520340
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
    
   0.426
KFL_004350060
Syntaxin; Belongs to the syntaxin family.
    
   0.426
KFL_008130040
Mitochondrial substrate carrier family protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.426
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.