STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_000760270Uncharacterized protein. (1591 aa)    
Predicted Functional Partners:
KFL_002180050
Uncharacterized protein.
   
 0.850
KFL_006330040
Uncharacterized protein.
   
 0.850
KFL_007010070
DJ-1_PfpI domain-containing protein.
   
 0.733
KFL_007010060
DJ-1_PfpI domain-containing protein.
   
 0.733
KFL_008980030
LIM domain-containing protein,DA1.
   
 0.698
KFL_004520080
Ras-related small GTPase.
    
 0.669
KFL_005790010
Actin related protein; Belongs to the actin family.
   
 0.661
KFL_001230120
Actin-related protein Arp2/3 complex subunit Arp3; Belongs to the actin family.
   
 0.656
KFL_000680050
Calmodulin.
   
 0.638
KFL_000430210
Peptidylprolyl isomerase.
   
 0.638
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.