STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_000990150ISCA-like protein. (171 aa)    
Predicted Functional Partners:
KFL_002600130
Methyltransferases.
  
 
 0.851
KFL_008870010
MTS domain-containing protein.
  
 
 0.851
KFL_000080510
Ribosomal protein S6 family protein.
  
 
 0.809
KFL_003310160
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
  
 
 0.806
KFL_000660130
Thymidine kinase; Belongs to the thymidine kinase family.
  
  
 0.792
KFL_001360250
Pentatricopeptide repeat domain containing protein.
   
 
 0.792
KFL_005450090
Peptidyl-tRNA hydrolase.
   
 
 0.733
KFL_000980030
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.724
rpl20
50S ribosomal protein L20, chloroplastic; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.724
KFL_002130200
Anaphase promoting complex Cdc20 subunits.
   
 0.723
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.