STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_000790430Uncharacterized protein. (292 aa)    
Predicted Functional Partners:
KFL_004950030
Uncharacterized protein.
   
 
 0.697
KFL_000080510
Ribosomal protein S6 family protein.
   
 
 0.686
KFL_000010480
Argonaute family protein; Belongs to the argonaute family.
    
 0.680
KFL_000640170
Uncharacterized protein.
    
 0.680
KFL_000850250
Argonaute family protein; Belongs to the argonaute family.
    
 0.680
KFL_002720160
Argonaute family protein.
    
 0.680
KFL_004520030
Argonaute family protein; Belongs to the argonaute family.
    
 0.680
KFL_004800020
Argonaute family protein; Belongs to the argonaute family.
    
 0.680
KFL_001360250
Pentatricopeptide repeat domain containing protein.
   
 
 0.666
KFL_003310010
Mitochondrial ribosomal protein L23.
   
   0.661
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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