STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_001430050Uncharacterized protein. (697 aa)    
Predicted Functional Partners:
KFL_010690030
WD_REPEATS_REGION domain-containing protein.
   
 
 0.786
KFL_000400260
Uncharacterized protein.
    
 
 0.712
KFL_001040040
Ubiquitin-like protein.
    
 0.649
KFL_002440090
Small ubiquitin-related modifier.
    
 0.649
KFL_003830120
Uncharacterized protein.
    
 0.649
KFL_001440130
Sumo conjugation enzyme 1; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.640
KFL_002310120
Sumo conjugation enzyme 1; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.640
KFL_003440120
Peptidyl-prolyl cis-trans isomerase.
    
  0.637
KFL_002850110
Protein kinase ATM/Tel1; Belongs to the PI3/PI4-kinase family.
    
  0.630
KFL_003580190
Rad60-SLD domain-containing protein.
    
 0.630
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.