STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_001610040Uncharacterized protein. (323 aa)    
Predicted Functional Partners:
KFL_000940230
NAD/FAD-utilizing protein possibly involved in translation.
  
 0.897
KFL_000620160
COPII vesicle protein.
  
 0.876
KFL_001980280
Uncharacterized protein.
  
 0.876
KFL_002630210
Uncharacterized protein.
  
 0.876
KFL_002540080
Uncharacterized protein.
  
 0.717
KFL_002540070
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase.
  
 0.717
KFL_003640040
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase.
  
 0.717
KFL_000040520
GTP-binding protein.
    
 
 0.645
KFL_003080030
GTP-binding protein.
    
 
 0.645
KFL_002800100
Pseudouridine synthase family protein.
   
   0.637
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.