STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_001080220Uncharacterized protein; Belongs to the GST superfamily. (421 aa)    
Predicted Functional Partners:
KFL_001240040
tRNA-binding domain-containing protein.
   
 0.909
KFL_004580010
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.909
KFL_000550060
SH3 domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.887
KFL_000460250
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.807
KFL_000480140
Homogentisate 1,2-dioxygenase.
  
 
 0.718
KFL_001690110
Eukaryotic translation elongation factor 1 gamma.
   
 0.685
KFL_001900140
Cytoplasmic glutamyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.652
KFL_001620140
DNA-directed RNA polymerase I subunit 42/43.
   
 
 0.649
KFL_003190150
Non-catalytic subunit of nuclear DNA-dependent RNA polymerases.
   
 
 0.649
KFL_000130330
Fumarylacetoacetate hydrolase family.
  
 
 0.646
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.