STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_001300200GYF domain-containing protein. (1864 aa)    
Predicted Functional Partners:
KFL_004930070
DEAD-box ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
    
 
 0.899
KFL_001440220
Translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.
    
 
 0.866
KFL_003490020
Uncharacterized protein.
    
 
 0.612
KFL_000770190
Uncharacterized protein.
    
   0.591
KFL_003520040
FHA domain-containing protein.
    
   0.591
KFL_004600020
Uncharacterized protein.
    
   0.591
KFL_003390110
CCR4-NOT transcription complex subunit 1.
   
 
 0.462
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.