STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_002030150Cysteine proteinases superfamily protein; Belongs to the peptidase C1 family. (345 aa)    
Predicted Functional Partners:
KFL_015910010
Uncharacterized protein.
    
   0.918
KFL_001340060
Uncharacterized protein; Belongs to the peptidase C1 family.
  
0.817
KFL_000010120
Uncharacterized protein; Belongs to the peptidase C1 family.
  
0.798
KFL_002320230
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.658
KFL_002200130
Uncharacterized protein.
    
 0.649
KFL_001110040
Saposin.
   
 
 0.636
KFL_001350010
Vesicle coat complex COPII subunit SEC13; Belongs to the WD repeat SEC13 family.
    
  0.617
KFL_005010060
Vacuolar-processing enzyme.
   
 
 0.596
KFL_000780320
INCENP_ARK-bind domain-containing protein.
   
 0.592
KFL_000940120
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.591
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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