STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_002160130GDP-GTP exchange factor. (2565 aa)    
Predicted Functional Partners:
KFL_006370070
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.905
KFL_001740120
Guanine nucleotide exchange family protein.
   
 
0.811
KFL_000450430
Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.
   
 0.809
KFL_002440040
PH domain-containing protein.
     
 0.804
KFL_001600170
Rab family GTPase.
    
 0.790
KFL_000670290
GTPase-activating protein.
    
 0.787
KFL_000850220
ADP-ribosylation factor GTPase-activating protein.
     
 0.761
KFL_001410120
GTP-binding ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
    
 0.760
KFL_001410130
GTP-binding ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
    
 0.760
KFL_000100490
ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
    
 0.760
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.