STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_001590090Galactosyl transferase. (519 aa)    
Predicted Functional Partners:
KFL_005630100
AMP-dependent synthetase and ligase family protein.
    
 0.629
KFL_006980040
Long chain fatty acid acyl-CoA ligase.
    
 0.629
KFL_000120060
Phosphoglucosamine mutase family protein.
     
 0.525
KFL_000970050
Mitochondrial substrate carrier protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
 0.508
KFL_000350090
Mitochondrial substrate carrier family protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
 0.508
KFL_000870050
Mitochondrial substrate carrier family protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
 0.508
KFL_003000060
Mitochondrial substrate carrier protein (Carnitine/acylcarnitine?); Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
 0.508
KFL_003230160
Mitochondrial substrate carrier family protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
 0.508
KFL_006050080
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
 0.508
KFL_006820060
Phosphoacetylglucosamine mutase; Interconverts GlcNAc-6-P and GlcNAc-1-P. Belongs to the phosphohexose mutase family.
     
 0.417
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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