STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_001460110Uncharacterized protein. (631 aa)    
Predicted Functional Partners:
KFL_001350010
Vesicle coat complex COPII subunit SEC13; Belongs to the WD repeat SEC13 family.
    
 0.984
KFL_004110110
Uncharacterized protein.
    
 0.984
KFL_002670060
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.
    
 0.872
KFL_000030470
Partial homology.
    
 0.841
KFL_000480120
Mitochondrial signal processing peptidase.
    
 0.841
KFL_001900170
Peptidase S24/S26A/S26B/S26C family protein.
    
 0.841
KFL_001550100
HEAT repeat protein.
    
 0.760
KFL_000810340
Mitochondrial inner membrane protease subunit IMP2.
    
 0.731
KFL_001420110
Mitochondrial inner membrane protease subunit 2.
    
 0.731
KFL_002150080
Signal peptidase I.
    
 0.731
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.