STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_002000080NMT1 domain-containing protein. (343 aa)    
Predicted Functional Partners:
KFL_008910050
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.914
KFL_005270050
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
    
  0.871
KFL_007820050
U3 small nucleolar RNA-associated protein 5.
   
 0.729
KFL_002910060
Ribosome biogenesis protein.
   
  0.720
KFL_005510060
WD-40 protein.
    
  0.712
KFL_000570170
WD40 repeat protein.
   
  0.709
KFL_005930050
Embryo sac development arrest 13.
   
  0.701
KFL_000340220
Down-regulated in metastasis family protein.
   
  0.692
KFL_007770020
Uncharacterized protein.
   
  0.692
KFL_000530450
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
  0.681
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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