STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_001850230Calmodulin. (146 aa)    
Predicted Functional Partners:
KFL_000860350
Uncharacterized protein.
   
 0.929
KFL_000450100
Dynein light chain.
   
  0.912
KFL_000720310
Calmodulin.
  
 
 
0.881
KFL_000210120
Dynein light chain.
   
  0.769
KFL_000250140
Dynein light chain.
   
  0.769
KFL_004720080
Cytoplasmic dynein intermediate chain.
   
  0.749
KFL_000160260
WD_REPEATS_REGION domain-containing protein.
    
 0.739
KFL_000250505
Uncharacterized protein.
   
 
 0.739
KFL_001460120
Transglutaminase-like.
    
 0.739
KFL_001400140
WD_REPEATS_REGION domain-containing protein.
   
  0.717
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.